I like the Academy content being expanded, especially with Eloise.
If I may say so I feel like Marjorie being able to get the protagonist expelled like that seems a bit over the top, especially given that the protag could be a countess at that point already or even at the end of the main story, trusted by the emperor and with a handful of very influential people in her back. Marjorie being able to just freely hypnotize and blackmail the protagonist already feels pretty off, but to me personally the whole setup seems a bit unbelievable, within the game world, not just from an outside perspective.
Don't get me wrong, the way you handled that path makes it so that this doesn't become an actual issue, because you left it to the players to evade that bit of content without even being forced to ignore the other student being bullied, it's just my 2 cents, feel entirely free to ignore them.
Looking forward to more magic academy content for sure, also finally got around to just play through the story without starting over every time, I'm very much enjoying the narration and world, also some of the music is awesome, for example the theme playing in Golden Leaf and Rahib, as well as that little town with the cute Goblin, I'm afraid I can't recall the towns name right now. There was also a mountain area, either before the 2nd temple or during the quest for the old mage that teaches Dark Matter, which had a surprisingly great theme.