I guess you have the Julia #1 branch in mind that lead into the Jenna+MC Feminization branch.Actually originally there was a path where Julia would feminize MC. And in that path it may not have even been Julia by herself. It may have been Julia/Jenna. I don't know I'd have to see if its in 4.7 or which version it was in. Not even sure what versions I still have outside 4.5, 4.7 and 6.0.
Also while Julia's 2nd path still shows up her 1st path seems to be gone.
The Wife Jenna Branch not even sure what that's called anymore. If it's actually called along the lines of Wife Jenna still that's not even listed in my game any longer.
So if you loaded a 4.5 save into 4.7 and saved continued to play and then brought that save forth the vanishing does still happen.
Either way it is extremely convuluted at this point. You may not agree with that but the statement is subjective.
And events are disjointed now. No one is saying that the changes shouldn't have been made. It's their game they can do what they want. I'm just saying it should probably been handled in a cleaner manner.
When you save Julia by beating up Paul the Julia #1 is gone and you play the Julia #2 romance branch and the Paul(a) branch.
Your main issue is a long outdated savegame, the Wife+Janna branch doesn't show up if the Wife isn't in the app, or has been removed due the changes to the branching structure.
Yes, an outdated savegame stays an outdated savegame even if you keep playing.
I agree with you, because of all the disconnected story branches the game isn't just convoluted but also confusing because different stories that even contradict each other happen at the same time. It's like reading 6 books at the same time and after each paragraph you roll a dice to find out which book you continue to read next.