I'm not counting Rin/Naomi nor Mitsuko/Hikari scenes because neither of those mom/daughter pairs are blood related
But in addition to the Aiko/Kana scene triggered through Lily's L2 obedience event and the mass mom/daughter orgy in Lily's L4 obed event (which does involve Aiko/Kana), both mentioned by Squark, you can also have repeatable 3-ways with Aiko/Kana once you've unlocked doll mode on both. And you can finger Aiko while Kana watches and jills off during Kana's L2 obed event
You can fuck Ayumi in front of her dad in Yatsumi's L3 obed event and in front of her mom in Fujiko's L4 one. You can fuck Atsuko while her son watches and jerks off in her L3 obed event and fuck her in front of him again in a later event in the mall. And you can fuck Utako and Kumiko in front of each other in Kumiko's L4 event and have a 3-way with them both in Utako's emancipation one. And finally, there are multiple 3-ways with the twins Eimi & Yae including ones where they kiss and trib each other
I haven't dug further to see if there are more in the endings, but those are the non-step-related events I know about