Where is your smoking quest at? The early smoking and consequence steps aren't necessary for the continuation of the later parts of the consequence quest or story in general, so you might have missed these parts. At the begginning of the consequence quest, you need to get punisheshed quite a lot of time. Eventually, Ann allows you to pay 1k or 2k to get punished privately in her room. That's what might not have done.
All the quest say finished as far as I'm aware