Hmm, seems at point after I moved my save from 1.1E to G with your mod it might have ended in a bugged state.U should talk to her near space port (week 3-4 I don't remember exactly) and be bold, then flirt to her in spaceport and help with delivery quest 5 times. And talk 1 more time.
Not because of your mod, I think it was bugged before and just borked afterwards, a restart would probably fix it. Or fiddling with values
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looks like there's a NariFlirt variable that was set at 2, setting it to three progressed her events
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